This tool computes the probability that a given kmer is a T-cell epitope restricted to a given HLA allele. The tool can scan for 8, 9, 10, and 11 mer epitopes and over all common HLA alleles. The currently installed version is RC1. For detailed description of Epitope Prediction program and for literature references please consult the Epitope Prediction web page.

Calculations will be carried out on the BioHPC compute cluster at CBSU. You will receive e-mail notifications when the job is submitted, when it starts, and when it is finished. Output will be available via links embedded in the notification e-mails. For more information about this program and BioHPC interface in general, please visit our Frequently Asked Questions page.

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E-mail:   (only guests need to use this field, registered users should log in)

Enter job name:                                         

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INPUT DATA (Required):    paste upload copy

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Has Header (optional): 

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mer Length (optional): 

scan 8 9 10 11 given

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Within D of Center (optional):  

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HLA Set (optional): 

singleton supertype all

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Model Only (optional): 

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Show By (optional): 

all hla length hla and length do not Group

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LANLIEDB03062007 (optional): 

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Cluster: Autocbsum1cbsusrv05cbsum2   ( Show timeout info )