LOOPP parallel driver v5.0 (06/13/08 15:45 EDT) with LOOPP v3.0 (compiled Jul 11 2008 17:20:20)
[NEWSABLE] [HSHFL] [ENE] [NEWALICHOICE]
This is HTML output, the other options are plain text, CASP AL and CASP TS formats.
If an error occured during execution it is logged in plain text version only,
there is no need to look for an error if this file ends with 'DONE' statement.
STARTING:Thu Aug 14 17:02:08 2008 EST
INPUT:
sim_min = 40.0% minimum sequence identity (%)
sim_max = 80.0% maximum sequence identity (%)
len_dif = 20.0% maximum length difference (% of query sequence length)
between query and homolog
nmax = 1 maximum number of homologous sequences (including query sequence)
maxout = 5 maximum number of outputted matches
strict = 0 all alignments will be accepted from LOOPP results
for homologs; they will be translated to query sequence
alignments using BLAST results
casp = 5 maximum number of outputted matches in CASP format
align = 'g' only corresponding global alignments will be reported
maxdiff = 50.0% only alignments differing no more than 50.0% from the query
sequence will be reported, or when reject=0, corresponding local
alignments will be reported
reject = 1 alignments shorter more than 50.0% from the query sequence
will be rejected
seccut = 0.00 structures with sec. str. score below seccut will be rejected
secdb = 1 type of secondary structure description: 1 - DSSB, 0 - phi/psi map
tasktb = 11111111111111111111 type of initial calculations
pdbcut = 60.0% pdb sequence identity threshold (%)
pdbstop = 0 stop if PDB structure with similarity above pdbcut found
domains = 0 query sequence will be decomposed into putative domains if =1
maxall = 300 maximum number of models evaluated in the second stage
refstr = 0 if equal to 1 rmsd distances between all hits and a reference structure
will be reported
maxpdb = 5 number of top PDB hits added to the second stage scoring
maxdyn = 5 number of dynamic domain entries from database added to the second stage scoring
beautify = 0 use pdb beautifier
rmsdtables = 1 compute rmsd tables between hits
local LOOPP/BLAST database will be used
input file T0452
--> 326 residues, sequence name: T0452
Database: T:\CBSU\blastdb\20080108\nr
-> 9 homolog sequences with sequence identity from 40.0% to 80.0% satisfying length constraints found
-> 0 representatives will be used in search (nmax=1 including query sequence)
Histogram of all homolog sequences found by BLAST (e-value cutoff 0.01, length constr.) by sequence identity:
| 00%-10% | 10%-20% | 20%-30% | 30%-40% | 40%-50% | 50%-60% | 60%-70% | 70%-80% | 80%-90% | 90%-100% |
| 0 | 0 | 0 | 4 | 4 | 5 | 0 | 0 | 0 | 1 |
1 | 2 | 3 | 4 | 5 | |
1 | 0.00 | 3.36 | 2.84 | 6.58 | 11.00 |
2 | 3.36 | 0.00 | 4.77 | 9.05 | 12.13 |
3 | 2.84 | 4.77 | 0.00 | 9.93 | 12.53 |
4 | 6.58 | 9.05 | 9.93 | 0.00 | 8.36 |
5 | 11.00 | 12.13 | 12.53 | 8.36 | 0.00 |
Similarity table for hits: percentage of chain fitting below 3Å RMSD (Cells are shaded according to similarity starting at 30%)
1 | 2 | 3 | 4 | 5 | |
1 | 100.00 | 73.75 | 100.00 | 48.72 | 26.53 |
2 | 73.75 | 100.00 | 52.81 | 40.22 | 26.29 |
3 | 100.00 | 52.81 | 100.00 | 25.54 | 26.80 |
4 | 48.72 | 40.22 | 25.54 | 100.00 | 37.50 |
5 | 26.53 | 26.29 | 26.80 | 37.50 | 100.00 |
Similarity table for hits: percentage of chain fitting below 6Å RMSD (Cells are shaded according to similarity starting at 50%)
1 | 2 | 3 | 4 | 5 | |
1 | 100.00 | 100.00 | 100.00 | 61.54 | 48.98 |
2 | 100.00 | 100.00 | 100.00 | 64.13 | 53.61 |
3 | 100.00 | 100.00 | 100.00 | 51.63 | 76.80 |
4 | 61.54 | 64.13 | 51.63 | 100.00 | 87.50 |
5 | 48.98 | 53.61 | 76.80 | 87.50 | 100.00 |
ALIGNMENTS
--> hit 1 [All-atom model (PDB)] [view all-atom model (PDB) with Chime] [PIR alignment file] [PDB file (backbone only)] [view PDB file (backbone only) with Chime] [hit list]
secondary structure: 34.92% helical, 20.63% extended, 44.44% loops/other (query: 40.80% 19.63% 39.57%)
SCOP classification: [Alpha and beta proteins (a+b)]/[FwdE/GAPDH domain-like]
name SCOP SCOP_stat confidence score homolog hits length seq. align ENE TE13 old CGenergy SIFT2 tma1 tma2 |-------OPTM------| |-------SEQ (global)-------| |-------SEQ (local)-------| |-------TRD (global)-------| |-------TRD (local)-------| |-------TRS (global)-------| |-------TRS (local)-------| |-------TSS (global)-------| |-------TSS (local)-------| |-------TSC (global)-------| |-------TSC (local)-------| |-------PSM (global)-------| |-------PSM (local)-------| |-------SRF (global)-------| |-------SRF (local)-------| |-------TBLS------| |-------KMER------| |-------CFTR------| |-------TBSS------| |-------SBLS------| sec. str.
(%) ident. src. all-atom all-atom score all-atom all-atom all-atom all-atom r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy pos. comp.
d.81.1.2.1_A d.81.1.2 9.1.1.1 NONE -85.522 0 1 49.08% 28.75% OPTM -604.000 -415.160 2.538 0.702 0.564 0.822 0.972 26.960 -49.2 1.770 -10.000 143.0 10.030 118.500 -234.0 0.680 5.820 96.5 0.060 -4.900 -36.1 1.330 5.290 142.0 6.800 17.790 -44.5 2.870 3.550 104.9 12.530 20.000 -65.3 -30.000 10.000 -31.0 -30.000 29.000 -121.0 5.900 71.000 99.0 33.510 304.000 -388.0 -5.000 -24.000 247.0 2.050 10.000 -72.0 5.000 -20.5 -1.405 -14.4 -64.000 351.0 5.000 -20.5 -0.509 -12.5 0.23 0.86
alignment source: OPTM
HHHHHHHHHH- ---HEEEEEE-----HHHHHHHHH-- --HHHHHHHHHH--------------HHHHHHHHHHHHH
Query: 147 PVVKLAKRYLA-LCEIESVKGIFNGTCNYILSRMEEER---LPYEHILKEAQELGYAEADPSYDVEGIDAALKLVIIANT 222
Sbjct: 151 PIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKLGYTEPDPRDDLNGLDVARKVTIVGRI 230
--HHHHHHHHHH---EEEEEEE--HHHHHHHHHH---------HHHHHHHHHHH-------HHHH--HHHHHHHHHHHHH
H---- -HH--EE--- ----HHHHHHHHH---- EEEEEEE---- EEEEEEE------
Query: 223 IGVKA-SYEDVEVTGI------------------TQITPEAFQVAAEKGYT---IRLIAEVSREK--LKVSPRLVPFHHP 278
Sbjct: 231 SGVEVESPTSFPVQSLIPKPLESVKSADEFLEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVATKSVSVGIEKYDYSHP 310
---------------------------HHHHHHH---HHHHHHHHHHH----EEEEEEEEEE----EEEEEEEEEE----
EE E----EEEEEE---- --EEEEE----
Query: 279 LA-IKGTMNAAMFKTDTA-GSIFVAGRGAG 306
Sbjct: 311 FASLKGSDNVISIKTKRYTNPVVIQGAGAG 340
--------EEEEEEE------EEEEE----
160 residues (49.08%) of query sequence aligned
--> hit 2 [All-atom model (PDB)] [view all-atom model (PDB) with Chime] [PIR alignment file] [PDB file (backbone only)] [view PDB file (backbone only) with Chime] [hit list]
secondary structure: 35.74% helical, 20.38% extended, 43.89% loops/other (query: 40.80% 19.63% 39.57%)
SCOP classification:
name SCOP SCOP_stat confidence score homolog hits length seq. align ENE TE13 old CGenergy SIFT2 tma1 tma2 |-------OPTM------| |-------SEQ (global)-------| |-------SEQ (local)-------| |-------TRD (global)-------| |-------TRD (local)-------| |-------TRS (global)-------| |-------TRS (local)-------| |-------TSS (global)-------| |-------TSS (local)-------| |-------TSC (global)-------| |-------TSC (local)-------| |-------PSM (global)-------| |-------PSM (local)-------| |-------SRF (global)-------| |-------SRF (local)-------| |-------TBLS------| |-------KMER------| |-------CFTR------| |-------TBSS------| |-------SBLS------| sec. str.
(%) ident. src. all-atom all-atom score all-atom all-atom all-atom all-atom r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy pos. comp.
3C8M_A not_found 27.27.27.27 NONE -85.603 0 1 97.24% 28.13% OPTM -1342.271 -867.380 10.864 0.668 0.586 0.949 0.949 72.710 -98.7 14.290 384.000 -420.5 20.660 345.500 -455.5 2.180 3.590 -42.3 2.810 12.600 -66.9 7.930 52.750 -49.2 12.590 49.150 -80.9 18.860 104.130 -134.8 30.820 94.040 -153.3 -30.000 116.000 -246.0 -30.000 96.000 -248.0 38.340 856.000 -843.0 80.000 821.000 -880.0 9.800 78.000 -188.0 10.810 71.000 -204.0 5.000 -43.1 -1.832 -10.1 0.000 -9.3e+061 5.000 -43.1 0.544 -26.0 0.62 0.88
alignment source: OPTM
+++ there is a problem with all-atom model, click here for details
EEEEEE-----HHHHHHHHHHHHHHHHHH---EEEEEEEE-------- --HHHHHHHHH---- ----HHHHHHHH-
Query: 2 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD-FSLVEALRMKRETGM---LRDDAKAIEVVRS 77
Sbjct: 4 INLSIFGLGNVGLNLLRIIRSFNEENRLGL-KFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALAR 82
EEEEE---HHHHHHHHHHHHHHHH-----E EEEEEEE----EEE-----HHHHHHHHH---------EE--HHHHHH--
----EEEEE-------HHHHHHHHHHHH----EEEE---HHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHH-
Query: 78 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYLA 157
Sbjct: 83 -DFDIVVDATPASADGKKELAFYKETFENGKDVVTANK-SGLANFWPEIEYARSNNRRIRYEATVAGGVPLFSFIDYSVL 160
--EEEE--------HHHHHHHHHHHH---EEEE---H HHHHH-----HHHHH---EE-----------HHHHHHH---
---HEEEEEE-----HHHHHHHHH----HHHHHHHHHH--------------HHHHHHHHHHHHHH -----HH--EE--
Query: 158 LCEIESVKGIFNGTCNYILSRMEEERLPYEHILKEAQELGYAEADPSYDVEGIDAALKLVIIANTI-GVKASYEDVEVTG 236
Sbjct: 161 PSRIKKFRGIVSLTINYFIRELANKR-EFDDVLSEATKLGIVEKNYKDDLTGLDAARKSVILCNHLYGSSYRLSDVFYEG 239
----EEEEE--HHHHHHHHHHH---- HHHHHHHHHHH-------HHHH--HHHHHHHHHHHHHHH---------EE---
-----HHHHHHHHH----EEEEEEE--- -EEEEEEE---- --EEE----EEEEEE------EEEEE------HHH
Query: 237 ITQITPEAFQVAAEKGYTIRLIAEVSRE--KLKVSPRLVPFH---HPLAIKGTMNAAMFKTDTAGSIFVAGRGAGKEETA 311
Sbjct: 240 ILQDRS--------FGKNERLVTETGIVNGKPSAESRIKSLDSNDYLLTLGKGSLGYQLQTDTNGTLNVSDLYDGPYETA 311
------ ---EEEEEEEEEE--EEEEEEEEEE---------------EEEEE-----EEEEE-----HHHHHH
HHHHHHHHHH
Query: 312 SAILSDLYEI 321
Sbjct: 312 GAV-NDLVIL 320
H-- HHHHH-
317 residues (97.24%) of query sequence aligned
--> hit 3 [All-atom model (PDB)] [view all-atom model (PDB) with Chime] [PIR alignment file] [PDB file (backbone only)] [view PDB file (backbone only) with Chime] [hit list]
secondary structure: 36.66% helical, 23.79% extended, 39.55% loops/other (query: 40.80% 19.63% 39.57%)
SCOP classification:
name SCOP SCOP_stat confidence score homolog hits length seq. align ENE TE13 old CGenergy SIFT2 tma1 tma2 |-------OPTM------| |-------SEQ (global)-------| |-------SEQ (local)-------| |-------TRD (global)-------| |-------TRD (local)-------| |-------TRS (global)-------| |-------TRS (local)-------| |-------TSS (global)-------| |-------TSS (local)-------| |-------TSC (global)-------| |-------TSC (local)-------| |-------PSM (global)-------| |-------PSM (local)-------| |-------SRF (global)-------| |-------SRF (local)-------| |-------TBLS------| |-------KMER------| |-------CFTR------| |-------TBSS------| |-------SBLS------| sec. str.
(%) ident. src. all-atom all-atom score all-atom all-atom all-atom all-atom r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy pos. comp.
2EJW_A not_found 27.27.27.27 NONE -85.743 0 1 94.17% 32.31% OPTM -1455.984 -756.750 10.509 0.682 0.660 0.898 0.915 72.950 -104.8 18.010 406.500 -468.5 30.660 435.000 -562.5 -0.550 -8.290 -27.0 1.190 5.510 -64.7 0.320 -3.940 4.3 11.360 48.220 -89.0 5.410 7.670 -55.5 22.370 61.380 -127.5 -30.000 50.000 -207.0 -30.000 54.000 -228.0 33.720 892.500 -797.5 90.310 832.500 -895.5 5.880 94.000 -186.0 9.300 75.000 -221.0 5.000 -62.0 -3.807 -20.8 0.000 -9.3e+061 5.000 -62.0 -0.959 -38.3 0.58 0.83
alignment source: OPTM
+++ there is a problem with all-atom model, click here for details
EEEEEE-----HHHHHHHHHHHHHHHHHH---EEEEEEEE----------HHHHHHHHH--------HHHHHHHH----
Query: 2 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADY- 80
Sbjct: 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAI----------PQELLRAE--------PFDLL 65
EEEEE---HHHHHHHHHHHH---------EEEEEEEEE----------- ---EE--- -----
-EEEEE-------HHHHHHHHHHHH----EEEE---HHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHH--
Query: 81 --DVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYLAL 158
Sbjct: 66 EADLVVEAMG---GVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPALSFLETLRG- 139
--EEEE---- -HHHHHHHHHHHH----EEE--HHHHHH-HHHHHHHHH--- EE-----------HHHHHHH---
--HEEEEEE-----HHHHHHHHH----HHHHHHHHHH--------------HHHHHHHHHHHHHH-- ---HH--EE---
Query: 159 CEIESVKGIFNGTCNYILSRMEEERLPYEHILKEAQELGYAEADPSYDVEGIDAALKLVIIANTIGV-KASYEDVEVTGI 237
Sbjct: 140 SELLELHGILNGTTLYILQEMEKGR-TYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGI 218
EEEEEEEE--HHHHHHHHHHH---- HHHHHHHHHH--------HHHH--HHHHHHHHHHHHHH----------EE----
----HHHHHHHHH----EEEEEEE---- EEEEEEE------EEE----EEEEEE------EEEEE------HHHHH
Query: 238 TQITPEAFQVAAEKGYTIRLIAEVSREK----LKVSPRLVPFHHPLAIKGTMNAAMFKTDTAGSIFVAGRGAGKEETASA 313
Sbjct: 219 ARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLARARG-NALWVRARPLGEAFVTGPGAGGGATASG 297
---HHHHHHHHH--EEEEEEEEEEEE--EEEEEEEEEEEE---HHHH---E EEEEEEE--EEEEEEE----HHHHHHHH
HHHHHHHHHH---
Query: 314 ILSDLYEIYAGPR 326
Sbjct: 298 LFADLLRFLSGAP 310
HHHHHHHH-----
307 residues (94.17%) of query sequence aligned
--> hit 4 [All-atom model (PDB)] [view all-atom model (PDB) with Chime] [PIR alignment file] [PDB file (backbone only)] [view PDB file (backbone only) with Chime] [hit list]
secondary structure: 44.79% helical, 15.34% extended, 39.88% loops/other (query: 40.80% 19.63% 39.57%)
SCOP classification: [Alpha and beta proteins (a/b)]/[NAD(P)-binding Rossmann-fold domains]
name SCOP SCOP_stat confidence score homolog hits length seq. align ENE TE13 old CGenergy SIFT2 tma1 tma2 |-------OPTM------| |-------SEQ (global)-------| |-------SEQ (local)-------| |-------TRD (global)-------| |-------TRD (local)-------| |-------TRS (global)-------| |-------TRS (local)-------| |-------TSS (global)-------| |-------TSS (local)-------| |-------TSC (global)-------| |-------TSC (local)-------| |-------PSM (global)-------| |-------PSM (local)-------| |-------SRF (global)-------| |-------SRF (local)-------| |-------TBLS------| |-------KMER------| |-------CFTR------| |-------TBSS------| |-------SBLS------| sec. str.
(%) ident. src. all-atom all-atom score all-atom all-atom all-atom all-atom r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy pos. comp.
c.2.1.3.38_A c.2.1.3 249.70.70.34 NONE -86.175 0 1 50.00% 11.41% OPTM -607.962 -379.540 0.782 0.515 0.452 0.799 0.892 10.900 -38.3 3.000 56.000 276.5 -0.050 -35.000 -73.0 1.700 10.480 122.4 0.280 -0.460 -47.2 2.430 15.020 175.3 0.840 2.280 -37.1 7.480 21.960 123.3 7.770 -0.640 -52.4 -30.000 7.000 3.0 -30.000 4.000 -121.0 6.310 103.000 224.0 7.920 51.000 -114.0 -4.010 -9.000 300.0 0.660 -6.000 -71.0 5.000 -1.1 0.749 -18.7 0.000 -9.3e+061 5.000 -1.1 5.000 0.5 0.69 0.83
alignment source: OPTM
+++ there is a problem with all-atom model, click here for details
EEEEEE-----HHHHHHHHHHHHHHHHHH---EEEEEEEE----------HHHHHHHHH--------HHHHHHHH-----
Query: 2 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 81
Sbjct: 6 LRIGVVGLGG-------IAQKAWLPVLAAASDWTLQGAWSPT-----RAKALPICESWRIP--YADS---LSSLAAS-CD 67
EEEEE----H HHH-HHHHHH----EEEEEEE---- --HHHHHHHH---- ---H HHHH--- -E
EEEEE-------HHHHHHHHHHHH----EEEE---H HHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHH----
Query: 82 VLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGP-LVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYLALCE 160
Sbjct: 68 AVFVHSSTA----SHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQT 143
EEE-----H HHHHHHHHHH---EEEEE------HHHHHHHHHHHHH----EEEE------HHHHHHHHHHHHH---
HEEEEEE----- HHHHHHHHH----
Query: 161 IESVKGIFNGTC---NYILSRMEEERLP 185
Sbjct: 144 VPQT---AGEQAVLAQRIVDKIWRDAMS 168
---- -----HHHHHHHHHHHHH--S
163 residues (50.00%) of query sequence aligned
--> hit 5 [All-atom model (PDB)] [view all-atom model (PDB) with Chime] [PIR alignment file] [PDB file (backbone only)] [view PDB file (backbone only) with Chime] [hit list]
secondary structure: 45.83% helical, 18.45% extended, 35.71% loops/other (query: 40.80% 19.63% 39.57%)
SCOP classification: [Alpha and beta proteins (a/b)]/[NAD(P)-binding Rossmann-fold domains]
name SCOP SCOP_stat confidence score homolog hits length seq. align ENE TE13 old CGenergy SIFT2 tma1 tma2 |-------OPTM------| |-------SEQ (global)-------| |-------SEQ (local)-------| |-------TRD (global)-------| |-------TRD (local)-------| |-------TRS (global)-------| |-------TRS (local)-------| |-------TSS (global)-------| |-------TSS (local)-------| |-------TSC (global)-------| |-------TSC (local)-------| |-------PSM (global)-------| |-------PSM (local)-------| |-------SRF (global)-------| |-------SRF (local)-------| |-------TBLS------| |-------KMER------| |-------CFTR------| |-------TBSS------| |-------SBLS------| sec. str.
(%) ident. src. all-atom all-atom score all-atom all-atom all-atom all-atom r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy zscore r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy r-energy energy pos. comp.
c.2.1.3.34_A c.2.1.3 249.70.70.34 NONE -86.224 0 1 49.08% 17.53% OPTM -566.674 -473.010 0.595 0.548 0.393 0.774 0.870 14.020 -41.4 2.310 8.500 220.5 3.650 43.000 -132.5 -0.410 -4.870 128.1 0.660 1.410 -51.6 -0.660 -2.170 182.8 -0.110 0.860 -36.3 2.790 4.190 133.1 9.300 2.760 -54.2 -30.000 11.000 -5.0 -30.000 7.000 -113.0 2.680 21.000 220.0 6.080 43.000 -114.0 -3.110 -12.000 289.0 1.710 4.000 -75.0 5.000 -5.0 1.233 -21.8 0.000 -9.3e+061 5.000 -5.0 0.255 -4.2 0.69 0.88
alignment source: OPTM
EEEEEE-----HHHHHHHHHHHHHHHHHH---EEEEEEEE----------HHHHHHHHH--------HHHHHHHH-----
Query: 2 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 81
Sbjct: 9 FGVVVVGVG----RAGSVRLRDLKDPRSAAF-LNLIGFVSRRELGSLD-----------EVRQIS----LEDALRSQEID 68
EEEEE---H HHHHHHHHH--HHHH--E EEEEEE------EE-- EE---H HHHHH---EEE
EEEEE-------HHHHHHHHHHHH----EEEE---H HHHHHHHHHHHHHH----EEEEE----- HHHHHHHHHHH
Query: 82 VLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGP-LVAEFHGLMSLAERNGVRLMYEATVGGA----MPVVKLAKRYL 156
Sbjct: 69 VAYICS----ESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKG-RVLHEEHVELLKNIFLKDQDIFVQKL 143
EEE--- ---HHHHHHHHHH---EEEEE------HHHHHHHHHHHHH--- -EEEE-------HHHHHHHHHHHHH-
----HEEEEEE-----HHHHHHHHH----HHHHHHHHHH
Query: 157 ALCEIESVKGIFNGTCNYILSRMEEERLPYEHILKEAQE 195
Sbjct: 144 LD----------QVS----AEDLAAEKKRIMHCLGLASD 168
-- --H HHHHHHHHHHHHHHHHHHHH
160 residues (49.08%) of query sequence aligned
DONE: Fri Aug 15 02:25:42 2008 EST