ClustalW is a general purpose multiple alignment program for DNA or protein sequences. The program may be run in serial mode (Real-Time cluster) or in parallel mode (for large sets of sequences) on one of our batch clusters.

Calculations will be carried out on the BioHPC compute cluster at CBSU. You will receive e-mail notifications when the job is submitted, when it starts, and when it is finished. Output will be available via links embedded in the notification e-mails. For more information about this program and BioHPC interface in general, please visit our Frequently Asked Questions page.

Please acknowledge us in all publications and presentation of work that used our resources using the following text . -->

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E-mail:  (only guests need to use this field, registered users should log in)

Job name:   (please, no spaces, special characters etc., uderscore is OK) 

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Input  file:   
Sequence type: Protein  DNA  


Action:       -align: Do full multiple alignment -profile: merge two alignments (PROFILE1 and 2) by profile or structure alignment -tree: calculate NJ tree -bootstrap of an NJ tree

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Job Options:
Run: Batch Real-time  CPUs:    Cluster:  ( Show timeout info )

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