The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing developed at Cold Spring Harbor Laboratory. For more information please go to the FASTX web page.

Calculations will be carried out on the BioHPC compute cluster at CBSU. You will receive e-mail notifications when the job is submitted, when it starts, and when it is finished. Output will be available via links embedded in the notification e-mails. For more information about this program and BioHPC interface in general, please visit our Frequently Asked Questions page.

Please acknowledge us in all publications and presentation of work that used our resources using the following text.

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SPECIFY FASTX PROGRAM

FASTQ/A Quality Statistics FASTQ-to-FASTA FASTQ Masker FASTQ Quality Converter FASTQ Quality Filter FASTQ Quality Trimmer FASTQ/A Clipper FASTQ/A Artifacts Filter FASTQ/A Collapser FASTQ/A Trimmer FASTQ/A Reverse Complement FASTA Formatter FASTA Nucleotides Changer FASTA Uncollapser FASTA/Q Renamer FASTX Barcode Splitter

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