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Version 1 Rev 186
(2009/07/02 16:36:55)

Retrieve Fasta Sequences@ BioHPC

This application uses NCBI  fastacmd with arguments { -d <database_name> -s "<query_keywords>"}   to retrieve sequences from a blast database.  You need login to use private databases.

Select fasta database:

Enter accession numbers or query keywords, one accession per line:

 

Messages:
Cluster Athena operating normally
Cluster biosim operating normally
Cluster cbsum1 operating normally
Cluster cbsum1c1b012 operating normally
Cluster biosim2K8 under maintenance:
Cluster cbsum2k8 operating normally
Cluster cbsusrv05 operating normally
Cluster cbsum2 operating normally

All applications active