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Version 1 Rev 454
(2011/12/21 10:37:26)

Retrieve Fasta Sequences@ BioHPC

This application uses NCBI  fastacmd with arguments { -d <database_name> -s "<query_keywords>"}   to retrieve sequences from a blast database.  You need login to use private databases.

Select fasta database:

Enter accession numbers or query keywords, one accession per line:

Enter range in the sequence (optional, leave empty for no limit):

Start:   End:

 

Messages:
Cluster Athena under maintenance:
Cluster biosim operating normally
Cluster biosim2K8 operating normally
Cluster cbsum2k8 operating normally
Cluster cbsusrv05 operating normally
Cluster cbsulm01 under maintenance:
Cluster CAC_v4_lease under maintenance:
Cluster biosim_linux operating normally
Cluster cbsuss04 operating normally
Cluster cbsum1c1b001 operating normally
Cluster cbsum2 operating normally

Application P-IPRSCAN under maintenance: